STRINGSTRING
Phatr15294 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15294" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15294Predicted protein (368 aa)    
Predicted Functional Partners:
Phatr3425
Predicted protein (394 aa)
   
   
 
0.824
Phatr19579
Predicted protein (843 aa)
 
 
  0.696
Phatr22622
Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one- codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner (693 aa)
   
   
  0.561
Phatr16018
Predicted protein (666 aa)
   
   
  0.561
Phatrdraft1812
Predicted protein (609 aa)
 
 
  0.551
IscS
Precursor of desulfurase cysteine desulfurase IscS (400 aa)
         
  0.533
CsdB
Selenocysteine lyase (386 aa)
         
  0.533
PheRS
Phenylalanyl-trna synthetase class IIc family protein (405 aa)
   
   
  0.515
Phatr47067
Predicted protein (1237 aa)
   
   
  0.506
Phatr18087
Adenylosuccinate lyase (499 aa)
         
  0.432
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (15%) [HD]