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Phatr15324 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15324" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15324Predicted protein (378 aa)    
Predicted Functional Partners:
Phatr22113
Bifunctional aspartokinase (870 aa)
     
 
  0.906
Phatr28937
Anthranilate phosphoribosyltransferasePredicted protein (357 aa)
       
 
  0.573
Phatr14230
Anthranilate phosphoribosyltransferasePredicted protein (357 aa)
       
 
  0.573
Phatr52316
Aspartokinase (468 aa)
     
 
  0.572
Phatr24238
Carbamate kinase (336 aa)
         
  0.504
ACC2
Biotin carboxylase (2282 aa)
   
   
  0.486
Phatr47067
Predicted protein (1237 aa)
         
  0.476
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
     
 
  0.457
ACL
Atp-citrate synthase (1082 aa)
     
 
  0.443
Phatr10902
Predicted protein (473 aa)
     
 
  0.441
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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