STRINGSTRING
Phatr15354 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15354" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15354Predicted protein (300 aa)    
Predicted Functional Partners:
Phatrdraft1637
Predicted protein (1253 aa)
     
  0.992
Phatr43464
Predicted protein (2890 aa)
     
  0.992
Phatr25666
Predicted protein (885 aa)
     
  0.991
Phatr50630
Predicted protein (971 aa)
     
 
  0.991
Phatr42570
Predicted protein (1267 aa)
     
 
  0.990
Phatr46837
Predicted protein (997 aa)
     
  0.990
Phatr708
Predicted protein (511 aa)
     
  0.990
Phatr16814
Predicted protein (662 aa)
     
  0.989
Phatr47176
Predicted protein (435 aa)
     
 
  0.988
Phatr25394
Predicted protein (528 aa)
     
 
  0.988
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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