STRINGSTRING
Phatr15472 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15472" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15472Predicted protein (201 aa)    
Predicted Functional Partners:
Phatr8239
Predicted protein (66 aa)
     
 
  0.709
Phatr7942
Predicted protein (71 aa)
     
 
  0.709
Phatr4209
Predicted protein (295 aa)
     
 
  0.709
Phatr18036
Predicted protein (385 aa)
     
 
  0.709
HSP70G
Protein heat shock protein (901 aa)
     
 
  0.598
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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