STRINGSTRING
Phatr15641 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15641" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15641Predicted protein (349 aa)    
Predicted Functional Partners:
Phatr11990
Predicted protein (330 aa)
   
 
  0.676
ACL
Atp-citrate synthase (1082 aa)
     
 
    0.573
Phatr47578
Predicted protein (333 aa)
         
  0.526
Phatr17671
Predicted protein (397 aa)
   
 
  0.514
Phatr14260
Predicted protein (163 aa)
 
   
  0.467
Phatr48985
Predicted protein (2198 aa)
     
 
  0.445
Phatr33756
Predicted protein (711 aa)
     
 
  0.445
Phatr44287
Predicted protein (364 aa)
           
  0.416
Phatr37569
Predicted protein (298 aa)
           
  0.416
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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