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STRINGSTRING
Phatr15683 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15683" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15683Predicted protein (249 aa)    
Predicted Functional Partners:
Phatr31367
Predicted protein (819 aa)
   
 
  0.596
Phatr47067
Predicted protein (1237 aa)
         
  0.478
Phatr51720
Fumarate reductase flavoprotein (668 aa)
   
 
  0.440
Phatr48112
Predicted protein (387 aa)
     
 
  0.428
Phatr15423
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily (367 aa)
     
 
  0.428
Phatr43018
NADPH-adrenodoxin oxidoreductase, mitochondrial (509 aa)
   
 
  0.427
Phatr54983
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
     
 
  0.400
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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