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STRINGSTRING
Phatr15689 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15689" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15689Predicted protein (441 aa)    
Predicted Functional Partners:
Phatr20787
Predicted protein; Belongs to the peptidase M16 family (473 aa)
   
 
0.979
Phatr24006
Predicted protein (749 aa)
     
 
  0.884
Phatr26515
Predicted protein (272 aa)
     
 
  0.868
HDR
Hydroxymethylbutenyl diphosphate reductase; Putative plastid isopentenyl diphosphate/dimethylallyl diphosphate synthase (401 aa)
         
  0.805
Phatrdraft218
Predicted protein (125 aa)
     
 
  0.721
Phatr43944
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain (493 aa)
     
 
  0.706
Phatr44603
Predicted protein (220 aa)
     
 
  0.698
petC
Cytochrome b6-f complex iron-sulfur subunit (217 aa)
     
 
  0.659
Phatr13358
Cytochrome b6-f complex iron-sulfur subunit (178 aa)
     
 
  0.659
Phatr12233
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (179 aa)
     
 
  0.659
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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