STRINGSTRING
Phatr15730 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15730" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15730Predicted protein (442 aa)    
Predicted Functional Partners:
Phatr44806
Predicted protein (585 aa)
       
  0.950
Phatr8945
Aminotransferase (412 aa)
   
  0.754
Phatr52110
Putative uncharacterized protein (427 aa)
   
  0.754
Phatr41686
Predicted protein (430 aa)
   
  0.754
LAG1
Longevity assurance protein (332 aa)
       
 
  0.608
Phatr46595
Predicted protein (480 aa)
       
 
  0.608
Phatr10378
Predicted protein (486 aa)
       
 
  0.593
Phatr44603
Predicted protein (220 aa)
       
      0.547
Phatr31906
Aldehyde dehydrogenase (551 aa)
     
  0.535
SSDH
Succinate semialdehyde dehydrogenase (471 aa)
     
  0.535
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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