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STRINGSTRING
Phatr15740 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15740" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15740Predicted protein; Belongs to the eukaryotic ribosomal protein P1/P2 family (115 aa)    
Predicted Functional Partners:
Phatr44971
Predicted protein (124 aa)
     
  0.993
Phatr26176
Predicted protein (408 aa)
     
   
  0.988
Phatr30660
Predicted protein (273 aa)
   
 
  0.969
Phatr51066
Predicted protein (152 aa)
   
 
  0.959
Phatr21073
Predicted protein (110 aa)
     
 
  0.956
Phatr50886
Predicted protein (145 aa)
     
 
  0.956
Phatrdraft477
Predicted protein (82 aa)
     
 
  0.954
Phatr28147
Predicted protein (62 aa)
     
 
  0.954
Phatr19413
Predicted protein; Belongs to the eukaryotic ribosomal protein eL38 family (69 aa)
     
 
  0.951
Phatr23748
Predicted protein (67 aa)
     
 
  0.949
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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