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Phatr15749 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15749" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15749Predicted protein (81 aa)    
Predicted Functional Partners:
Phatr6311
Predicted protein (127 aa)
   
          0.521
Phatr4339
Predicted protein (222 aa)
   
          0.520
PHATR_1379
Predicted protein (350 aa)
   
          0.515
Phatr4344
Predicted protein (169 aa)
   
          0.513
Phatr49670
Predicted protein (454 aa)
   
          0.510
Phatr11793
Predicted protein (263 aa)
   
          0.497
Phatr3656
Predicted protein (247 aa)
   
          0.495
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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