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Phatr15848 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15848" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15848Predicted protein (206 aa)    
Predicted Functional Partners:
Phatr26057
Predicted protein (386 aa)
  0.998
Phatr9987
Predicted protein (350 aa)
 
  0.927
Phatr9706
Predicted protein (169 aa)
 
   
  0.805
Phatr9035
Glutaredoxin (117 aa)
     
 
  0.669
GLRXM1
Glutaredoxin (149 aa)
     
 
  0.669
Phatr27972
Predicted protein (338 aa)
     
 
  0.669
Phatr30572
Predicted protein (462 aa)
     
 
  0.530
Phatr15374
Predicted protein (442 aa)
     
 
  0.530
Phatr37723
Predicted protein (470 aa)
       
      0.530
Phatr19835
Predicted protein (208 aa)
   
   
  0.423
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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