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Phatr15852 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15852" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15852Predicted protein (138 aa)    
Predicted Functional Partners:
SOD2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (226 aa)
     
  0.954
SOD1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (216 aa)
     
  0.954
Trx-f
Thioredoxin f (107 aa)
     
  0.708
Trx-h2
Thioredoxin h (109 aa)
     
  0.708
Phatr14885
Predicted protein (100 aa)
     
  0.708
Phatr12104
Predicted protein (106 aa)
     
  0.708
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
   
  0.700
Phatr48636
Glutathione peroxidase (177 aa)
   
  0.637
Phatr46798
Putative uncharacterized protein (347 aa)
   
  0.637
Phatr13005
Glutathione peroxidase (157 aa)
   
  0.637
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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