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STRINGSTRING
Phatr15929 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15929" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15929Predicted protein (202 aa)    
Predicted Functional Partners:
Phatr44512
Predicted protein (340 aa)
     
 
  0.927
Phatr46289
Predicted protein (338 aa)
     
 
  0.905
Phatr14553
Predicted protein; Belongs to the protein kinase superfamily (321 aa)
   
 
  0.645
CBP
Calcium binding protein (132 aa)
       
 
  0.630
Phatr49634
Predicted protein (621 aa)
       
 
  0.630
Phatr44009
Predicted protein (526 aa)
       
 
  0.630
CaM2
Calmodulin (154 aa)
       
 
  0.630
CaM1
Calmoduline (149 aa)
 
   
 
  0.630
Phatr21744
Predicted protein (149 aa)
       
 
  0.630
Phatr32914
Predicted protein (281 aa)
     
 
  0.575
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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