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Phatr15948 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15948" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15948Predicted protein (262 aa)    
Predicted Functional Partners:
Phatr1769
Predicted protein (395 aa)
       
  0.969
Phatr6834
Predicted protein (143 aa)
       
  0.965
Phatr3559
Predicted protein (351 aa)
   
 
  0.962
Phatr22117
Predicted protein (407 aa)
   
 
  0.962
Phatr35566
Predicted protein (222 aa)
     
  0.957
Phatr15968
Predicted protein (1387 aa)
         
  0.954
Phatr51242
Predicted protein (342 aa)
     
  0.947
Phatr34898
Predicted protein (257 aa)
       
  0.913
Phatr26336
Predicted protein (179 aa)
       
  0.913
Phatr29887
Predicted protein (564 aa)
       
  0.913
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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