STRINGSTRING
Phatr15952 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15952" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15952Predicted protein (123 aa)    
Predicted Functional Partners:
Phatr49419
Predicted protein (343 aa)
         
 
0.800
Phatr33304
Predicted protein (122 aa)
       
    0.691
Phatr20588
Predicted protein (87 aa)
       
    0.583
Phatr20167
Predicted protein (87 aa)
       
    0.583
Phatr15709
Predicted protein (100 aa)
       
    0.583
Phatr13520
Predicted protein (127 aa)
       
 
  0.576
Phatr35063
Predicted protein (165 aa)
       
  0.537
Phatr51100
Predicted protein (110 aa)
       
  0.534
Phatr9806
Predicted protein (195 aa)
       
 
  0.524
Phatr8518
Predicted protein (66 aa)
       
    0.505
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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