STRINGSTRING
Phatr15980 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15980" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15980Predicted protein (119 aa)    
Predicted Functional Partners:
CHLH
Protoporphyrin IX magnesium chelatase, subunit H (1343 aa)
   
   
  0.648
Phatr33017
Predicted protein; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (711 aa)
     
   
  0.616
HemA
Glutamyl-tRNA reductase (512 aa)
     
   
  0.586
PsbO
Oxygen-evolving enhancer protein 1 (308 aa)
   
        0.582
Phatr15371
Predicted protein (141 aa)
   
        0.579
Phatr11022
Predicted protein (366 aa)
   
        0.574
Phatr31683
Predicted protein (426 aa)
   
   
  0.567
chlM
Magnesium-protoporphyrin IX methyltransferase (258 aa)
   
   
  0.565
Phatr11792
Predicted protein (278 aa)
   
        0.555
Phatr7136
Predicted protein (147 aa)
   
        0.537
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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