STRINGSTRING
Phatr16032 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr16032" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16032Predicted protein (422 aa)    
Predicted Functional Partners:
Mob1
Predicted protein (214 aa)
     
  0.990
Phatr9200
Predicted protein (274 aa)
   
0.902
Phatr14553
Predicted protein (321 aa)
   
 
  0.853
Phatrdraft383
Predicted protein (346 aa)
     
  0.835
Phatr14345
Predicted protein (367 aa)
     
  0.835
Phatr14177
Predicted protein (370 aa)
     
  0.835
Phatr2845
Predicted protein (268 aa)
   
 
0.827
Phatr10628
Predicted protein (575 aa)
     
 
0.802
Phatr1758
Predicted protein (374 aa)
     
 
  0.783
cdc14
Predicted protein (298 aa)
       
 
  0.760
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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