STRINGSTRING
Phatr16065 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr16065" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16065Predicted protein (252 aa)    
Predicted Functional Partners:
Phatr20188
Predicted protein (693 aa)
     
 
  0.969
EIF6
Predicted protein; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis (249 aa)
   
 
  0.944
Phatr13361
Predicted protein (389 aa)
       
      0.938
Phatr10617
Predicted protein (229 aa)
       
      0.654
Phatr19152
Predicted protein (157 aa)
   
 
  0.643
Phatr30660
Predicted protein (273 aa)
       
 
  0.640
Phatr19025
Predicted protein (205 aa)
       
 
  0.610
Phatr49459
Predicted protein (868 aa)
     
 
  0.604
Phatr45319
Predicted protein (1013 aa)
     
 
  0.604
Phatr44833
Predicted protein (461 aa)
     
 
  0.604
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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