STRINGSTRING
Phatr16155 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr16155" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16155Predicted protein (153 aa)    
Predicted Functional Partners:
Phatr50322
Predicted protein (425 aa)
     
 
  0.774
Phatr47057
Predicted protein (1458 aa)
     
 
  0.774
Phatr50326
Predicted protein (998 aa)
     
 
  0.763
Phatr54743
Predicted protein (347 aa)
       
    0.724
Phatr11145
Predicted protein (325 aa)
       
  0.692
Phatr10029
Predicted protein (109 aa)
       
  0.692
Phatrdraft1638
Predicted protein (548 aa)
     
  0.638
Phatr7848
Predicted protein (135 aa)
       
    0.598
Phatr43802
Predicted protein (1189 aa)
       
 
  0.564
Phatr49177
Predicted protein (1336 aa)
     
 
  0.541
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (9%) [HD]