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STRINGSTRING
Phatr16283 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr16283" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16283Predicted protein (249 aa)    
Predicted Functional Partners:
Phatr12269
Predicted protein (300 aa)
   
   
  0.840
Phatr35064
Predicted protein (348 aa)
     
 
  0.815
Phatr9634
Predicted protein (480 aa)
     
 
  0.797
Phatr38985
Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family (254 aa)
     
 
  0.791
MPDC
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes (415 aa)
     
   
  0.742
Phatr9984
Predicted protein (249 aa)
 
 
  0.715
DXR
1-deoxy-d-xylulose-5-phosphate reductoisomerase (402 aa)
     
   
  0.712
Phatr42245
Predicted protein (575 aa)
     
   
  0.672
Phatr43429
Chorismate synthase (442 aa)
     
   
  0.651
Phatr47199
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2) (323 aa)
     
 
  0.623
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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