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Lhcf12 protein (Phaeodactylum tricornutum) - STRING interaction network
"Lhcf12" - Protein fucoxanthin chlorophyll protein in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lhcf12Protein fucoxanthin chlorophyll protein (193 aa)    
Predicted Functional Partners:
Phatr51541
Methionine-dependent methyltransferase (214 aa)
           
  0.510
Lhcr1
Protein fucoxanthin chlorophyll a/c protein (168 aa)
           
  0.477
Lhcr2
Protein fucoxanthin chlorophyll a/c protein (216 aa)
           
  0.443
Gsr_2
Glutathione reductase (496 aa)
           
  0.430
Tic110
Translocator of the inner chloroplast envelope membrane 110k (1162 aa)
           
  0.426
CaM2
Calmodulin (154 aa)
           
  0.420
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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