STRINGSTRING
Phatr16445 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr16445" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16445Predicted protein (365 aa)    
Predicted Functional Partners:
Phatr33017
Predicted protein; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (711 aa)
         
  0.663
Phatr36168
Predicted protein (340 aa)
 
   
  0.662
Phatr8706
Predicted protein (398 aa)
       
  0.587
Phatr43298
Predicted protein (298 aa)
       
  0.587
Phatr37572
Predicted protein (977 aa)
       
  0.587
PF2K1
Bifunctional 6-phosphofructo-2-kinase (540 aa)
       
  0.587
Phatr38891
Predicted protein (373 aa)
       
  0.574
Phatr45992
Predicted protein (405 aa)
       
  0.531
Phatr47329
Predicted protein (261 aa)
       
  0.448
METH
Methionine synthase (1245 aa)
         
  0.427
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (11%) [HD]