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STRINGSTRING
Phatr16445 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr16445" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16445Predicted protein (365 aa)    
Predicted Functional Partners:
Phatr38891
Predicted protein (373 aa)
   
   
  0.585
Phatr12925
Predicted protein; Belongs to the precorrin methyltransferase family (255 aa)
         
  0.580
Phatr45992
Predicted protein (405 aa)
         
  0.566
Phatr29887
Predicted protein (564 aa)
         
  0.548
CHLH
Protoporphyrin IX magnesium chelatase, subunit H (1343 aa)
         
  0.454
Phatr10100
annotation not available (1250 aa)
         
  0.454
Phatr26952
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (421 aa)
         
  0.448
Phatr47329
Predicted protein (261 aa)
   
   
  0.430
Phatr36608
Predicted protein (347 aa)
   
   
  0.430
Phatr33014
Predicted protein (436 aa)
         
  0.412
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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