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Phatr16540 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr16540" - Aldehyde dehydrogenase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16540Aldehyde dehydrogenase (432 aa)    
Predicted Functional Partners:
Phatrdraft645
Acetyl-coenzyme A synthetase (732 aa)
   
  0.960
Phatr22974
Acetate-coa, ligase (675 aa)
   
  0.960
ADH_2
Alcohol dehydrogenase (340 aa)
   
  0.950
Phatr41470
Predicted protein (331 aa)
   
  0.938
Phatr22955
Predicted protein (311 aa)
       
  0.904
Phatr9546
Predicted protein (191 aa)
       
    0.900
FAO1
Peroxisomal bifunctional enzyme (767 aa)
   
  0.770
Phatr35240
Predicted protein (684 aa)
   
  0.770
NRPS
Non ribosomal peptide synthase (1367 aa)
   
 
  0.760
Phatr8945
Aminotransferase (412 aa)
   
  0.736
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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