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PGM_2 protein (Phaeodactylum tricornutum) - STRING interaction network
"PGM_2" - Phosphoglucomutase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGM_2Phosphoglucomutase (528 aa)    
Predicted Functional Partners:
GPI_2
Glucose-6-phosphate isomerase (551 aa)
   
 
  0.972
Tkl
Transketolase (664 aa)
   
  0.947
Phatr29260
Transketolase (684 aa)
   
  0.947
Phatr54493
Udp-n-acetylglucosamine diphosphorylase (600 aa)
   
  0.944
Phatr15495
Glucokinase (235 aa)
       
  0.943
UGP/PGM
UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase (629 aa)
     
  0.936
Phatr39942
Predicted protein (301 aa)
         
    0.921
Phatr4059
Predicted protein (312 aa)
       
  0.911
Phatr32326
Predicted protein (309 aa)
       
  0.911
Phatr13382
Predicted protein (244 aa)
   
 
  0.910
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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