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Phatr16599 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr16599" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16599Predicted protein; Involved in the catabolism of quinolinic acid (QA) (294 aa)    
Predicted Functional Partners:
Phatr14735
Predicted protein (228 aa)
       
  0.965
Phatr29887
Predicted protein (564 aa)
     
  0.953
Phatr30807
Predicted protein (641 aa)
     
  0.912
Phatr13606
Predicted protein (338 aa)
         
  0.900
Phatr45509
Predicted protein (723 aa)
       
  0.752
Phatr12107
Predicted protein (460 aa)
         
  0.700
Phatr49101
Predicted protein (174 aa)
       
  0.559
Phatr32661
Predicted protein (237 aa)
       
  0.559
Phatr40650
Predicted protein (582 aa)
       
  0.538
Phatr47067
Predicted protein (1237 aa)
         
  0.527
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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