STRINGSTRING
Phatr16606 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr16606" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16606Predicted protein (130 aa)    
Predicted Functional Partners:
Phatr13154
Predicted protein (885 aa)
   
  0.785
Phatr13895
Predicted protein (330 aa)
 
   
  0.531
Phatr47293
Predicted protein (580 aa)
              0.499
Phatr31367
Predicted protein (819 aa)
         
  0.491
Phatr9046
Predicted protein (163 aa)
     
 
  0.477
Phatr8155
Predicted protein (102 aa)
     
 
  0.477
Phatr49253
Predicted protein (566 aa)
         
  0.459
Phatr45621
Predicted protein (426 aa)
   
   
  0.445
Phatr15371
Predicted protein (141 aa)
   
        0.433
Phatr16343
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation (165 aa)
         
  0.424
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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