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Phatr16719 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr16719" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16719Predicted protein (182 aa)    
Predicted Functional Partners:
Phatr48846
Predicted protein (627 aa)
     
  0.850
Phatr47020
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell (306 aa)
     
  0.666
Phatr7755
Predicted protein (88 aa)
     
  0.642
Phatr43649
Predicted protein (775 aa)
     
  0.642
Phatr9020
Predicted protein (364 aa)
 
 
  0.625
Phatrdraft278
Predicted protein (77 aa)
   
 
  0.619
Phatr46593
Predicted protein (225 aa)
   
 
  0.619
Phatr16693
Predicted protein (195 aa)
   
 
  0.619
Phatr24772
Predicted protein (801 aa)
     
 
  0.598
Phatr38642
Predicted protein (587 aa)
     
 
  0.588
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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