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STRINGSTRING
Phatr16932 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr16932" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16932Predicted protein (361 aa)    
Predicted Functional Partners:
Phatr45841
Predicted protein (331 aa)
     
  0.998
Phatr28833
Predicted protein (464 aa)
         
  0.988
Phatr7108
Predicted protein (138 aa)
     
  0.979
Phatr49325
Predicted protein; Belongs to the FPP/GGPP synthase family (343 aa)
     
 
  0.978
Phatr47271
Predicted protein; Belongs to the FPP/GGPP synthase family (330 aa)
     
 
  0.965
Phatr19000
Farnesyltranstransferase; Belongs to the FPP/GGPP synthase family (337 aa)
     
 
  0.937
Phatr9832
Protein-S-isoprenylcysteine O-methyltransferase (187 aa)
           
  0.899
Phatr13160
Predicted protein (314 aa)
     
 
  0.874
Phatrdraft590
Predicted protein (334 aa)
     
 
  0.785
Phatrdraft465
Predicted protein (334 aa)
     
 
  0.785
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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