STRINGSTRING
CYCA/B_1 protein (Phaeodactylum tricornutum) - STRING interaction network
"CYCA/B_1" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYCA/B_1Predicted protein (234 aa)    
Predicted Functional Partners:
Phatr45416
Predicted protein (632 aa)
     
  0.924
CDKA2
Predicted protein (298 aa)
     
  0.910
Phatr44306
Predicted protein (865 aa)
     
  0.910
hCDK3
Predicted protein (295 aa)
     
  0.910
CDKA1
Predicted protein (290 aa)
     
  0.910
MYT1
Predicted protein (1108 aa)
     
  0.903
Phatr10628
Predicted protein (575 aa)
     
  0.896
CDC6
Predicted protein (1107 aa)
     
  0.889
MCM7
Predicted protein (618 aa)
     
  0.885
MCM5
Predicted protein (667 aa)
     
  0.882
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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