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Phatr17300 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr17300" - Lissencephaly-1 homolog in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr17300Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes (439 aa)    
Predicted Functional Partners:
Phatr1971
Predicted protein (492 aa)
         
    0.900
Phatr42917
Predicted protein (509 aa)
       
  0.879
DHC1
Predicted protein (4020 aa)
       
  0.837
Phatr48160
Predicted protein (677 aa)
     
  0.776
Phatr46372
Absent, small, or homeotic discs 2 (687 aa)
     
  0.773
Phatr16875
Predicted protein (164 aa)
     
  0.754
Phatr6915
Predicted protein (139 aa)
     
  0.744
Phatr44935
Predicted protein (2187 aa)
     
  0.744
Phatr21456
Predicted protein (141 aa)
     
  0.744
Phatr15937
Predicted protein (154 aa)
     
  0.744
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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