STRINGSTRING
Phatr17408 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr17408" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr17408Predicted protein (1303 aa)    
Predicted Functional Partners:
Phatr16704
Predicted protein (1045 aa)
     
  0.998
Phatr10566
Predicted protein (93 aa)
     
  0.997
Phatr49469
Predicted protein (522 aa)
     
  0.996
Phatr51283
Predicted protein (328 aa)
     
  0.995
Phatr51232
Predicted protein (110 aa)
       
  0.994
PHATR_8132
Predicted protein (102 aa)
       
  0.993
Phatr45989
Predicted protein (1008 aa)
     
  0.991
Phatrdraft1638
Predicted protein (548 aa)
     
  0.991
Phatr19982
Predicted protein (2347 aa)
     
  0.988
Phatr13192
Predicted protein (74 aa)
     
  0.987
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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