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Phatr17414 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr17414" - 40S ribosomal protein S8 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr1741440S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family (205 aa)    
Predicted Functional Partners:
Phatr25714
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family (205 aa)
     
 
  0.999
Phatr18559
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family (245 aa)
   
 
  0.999
Phatr31919
Predicted protein (305 aa)
   
 
  0.999
Phatr21323
Predicted protein (137 aa)
     
 
  0.999
Phatr34146
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family (199 aa)
     
 
  0.999
Phatr9199
Predicted protein; Belongs to the universal ribosomal protein uS15 family (151 aa)
     
 
  0.999
Phatr48411
Predicted protein; Belongs to the universal ribosomal protein uS5 family (264 aa)
     
 
  0.999
Phatr50701
Predicted protein; Belongs to the universal ribosomal protein uS12 family (143 aa)
     
 
  0.999
Phatr13361
Predicted protein; Belongs to the universal ribosomal protein uL3 family (389 aa)
     
 
  0.999
Phatrdraft477
Predicted protein (82 aa)
     
 
  0.999
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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