STRINGSTRING
Phatr17427 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr17427" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr17427Predicted protein (695 aa)    
Predicted Functional Partners:
Phatr19659
Iron-containing dehydrogenase (465 aa)
     
  0.845
Phatr9728
Predicted protein (130 aa)
       
  0.768
Phatr43799
Predicted protein (149 aa)
       
  0.768
Phatr42437
Predicted protein (428 aa)
   
 
  0.761
Phatr38005
Predicted protein (1005 aa)
   
 
  0.761
Phatr43792
Predicted protein (154 aa)
   
 
  0.705
GLXI
Lactyolglutathione lyase (310 aa)
   
 
  0.705
GAPN
Glyceraldehyde-3-phosphate dehydrogenase (588 aa)
   
  0.702
Phatr16540
Aldehyde dehydrogenase (432 aa)
   
  0.701
Phatr31906
Aldehyde dehydrogenase (551 aa)
   
  0.700
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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