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Phatr17628 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr17628" - Queuine tRNA-ribosyltransferase in Phaeodactylum tricornutum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Phatr17628Queuine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (390 aa)    
Predicted Functional Partners:
Phatr41702
Predicted protein (671 aa)
         
  0.646
Phatr18064
Predicted protein (298 aa)
 
       
  0.537
Phatr27735
Predicted protein (538 aa)
   
   
  0.527
Phatr44863
Predicted protein (956 aa)
   
   
  0.488
Phatr20608
Predicted protein (830 aa)
   
   
  0.488
Phatr47067
Predicted protein (1237 aa)
   
   
  0.470
Phatr20773
Predicted protein (484 aa)
   
   
  0.456
Phatr11965
Predicted protein (194 aa)
   
   
  0.456
Phatr25204
Predicted protein (598 aa)
   
   
  0.445
Phatr19901
Predicted protein (900 aa)
         
  0.428
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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