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STRINGSTRING
Phatr17671 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr17671" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr17671Predicted protein (397 aa)    
Predicted Functional Partners:
Phatr41645
Predicted protein; Belongs to the complex I 20 kDa subunit family (166 aa)
   
 
  0.995
Phatr20787
Predicted protein; Belongs to the peptidase M16 family (473 aa)
     
 
  0.988
Phatr34392
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (219 aa)
     
 
  0.987
Phatr43944
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain (493 aa)
     
 
  0.986
Phatr22919
Predicted protein (260 aa)
     
 
  0.979
Phatr11305
Predicted protein (83 aa)
     
 
  0.973
Phatr14260
Predicted protein (163 aa)
   
 
  0.945
SDH2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (273 aa)
     
 
  0.935
Phatr28620
Predicted protein (136 aa)
     
 
  0.922
Phatr26515
Predicted protein (272 aa)
     
 
  0.895
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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