STRINGSTRING
Phatr1769 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr1769" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr1769Predicted protein (395 aa)    
Predicted Functional Partners:
Phatr15968
Predicted protein (1387 aa)
 
 
  0.985
Phatr15948
Predicted protein (262 aa)
       
  0.969
Phatr6834
Predicted protein (143 aa)
       
  0.908
Phatr35566
Predicted protein (222 aa)
       
  0.904
Phatr49522
5-hydroxyisourate hydrolase (299 aa)
 
   
  0.730
Phatr11088
Predicted protein (1086 aa)
     
      0.551
Phatr18404
Predicted protein (512 aa)
       
    0.520
Phatr15083
Predicted protein (374 aa)
       
    0.520
Phatr52619
Purine permease (593 aa)
   
   
  0.469
Phatr31650
Solute carrier (590 aa)
   
   
  0.469
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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