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NURF-55 protein (Phaeodactylum tricornutum) - STRING interaction network
"NURF-55" - Chromatin assembly factor subunit c in Phaeodactylum tricornutum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NURF-55Chromatin assembly factor subunit c (466 aa)    
Predicted Functional Partners:
HAT
Histone acetyltransferase (520 aa)
     
  0.987
Phatr51026
Histone deacetylase (426 aa)
     
  0.979
Phatr49800
Histone deacetylase (426 aa)
     
  0.979
Phatr19333
Predicted protein (411 aa)
     
 
  0.970
RBR
Predicted protein (1198 aa)
     
  0.966
Phatr34971
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
       
  0.962
H4-1a
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
       
  0.962
Phatr9860
Predicted protein (318 aa)
     
  0.910
Phatr45431
Predicted protein (1158 aa)
     
  0.906
Phatr6698
Predicted protein (106 aa)
       
  0.891
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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