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Phatr18228 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr18228" - Triosephosphate isomerase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr18228Triosephosphate isomerase (298 aa)    
Predicted Functional Partners:
Phatr29157
Phosphoglycerate kinase (441 aa)
  0.997
PGK
Phosphoglycerate kinase (448 aa)
  0.997
Phatr14792
Phosphoglycerate kinase (432 aa)
  0.996
Phatrdraft1572
Enolase (464 aa)
   
  0.990
Phatrdraft1192
Annotation not available (457 aa)
   
  0.990
Phatr41515
Enolase (437 aa)
   
  0.990
GPI_3
Glucose-6-phosphate isomerase (518 aa)
   
 
  0.982
GPI_1
Glucose-6-phosphate isomerase (554 aa)
   
 
  0.982
GPI_2
Glucose-6-phosphate isomerase (551 aa)
   
 
  0.982
Phatr5857
Predicted protein (186 aa)
   
 
  0.978
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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