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Phatr18319 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr18319" - Adenosylhomocysteinase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr18319Adenosylhomocysteinase (481 aa)    
Predicted Functional Partners:
METH
Methionine synthase (1245 aa)
       
  0.991
Cbs
Predicted protein (469 aa)
   
 
  0.955
Phatrdraft542
Cysteine synthase (336 aa)
   
 
  0.954
Phatr49903
Predicted protein (654 aa)
     
 
  0.940
Phatrdraft913
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (386 aa)
   
   
  0.921
Phatr54915
Eukaryotic cysteine synthase (356 aa)
   
 
  0.900
Phatr28056
Predicted protein (757 aa)
     
 
  0.881
Phatr15917
Cystathionine gamma-lyase (392 aa)
     
 
  0.880
Phatr22113
Bifunctional aspartokinase (870 aa)
     
 
  0.873
Phatrdraft877
L-serine ammonia-lyase (340 aa)
     
 
  0.810
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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