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STRINGSTRING
Phatr18404 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr18404" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr18404Predicted protein (512 aa)    
Predicted Functional Partners:
Phatr36913
Predicted protein (357 aa)
   
   
  0.907
Phatr21116
Predicted protein; Argininosuccinate synthase (418 aa)
   
 
  0.895
Phatr13602
Predicted protein (620 aa)
 
 
 
  0.878
Phatr27735
Predicted protein (538 aa)
   
   
  0.866
Phatr12762
Predicted protein (282 aa)
           
  0.797
Phatr30514
Predicted protein; Belongs to the ATCase/OTCase family (351 aa)
         
  0.728
Phatr18319
Adenosylhomocysteinase (481 aa)
         
  0.697
Phatr30660
Predicted protein (273 aa)
     
   
  0.695
Phatr37436
Predicted protein (431 aa)
 
 
  0.632
Phatr44775
Predicted protein (580 aa)
         
  0.623
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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