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Phatr18533 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr18533" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr18533Predicted protein (172 aa)    
Predicted Functional Partners:
Phatr51280
Predicted protein (185 aa)
     
  0.894
Phatr9241
Predicted protein; Catalyzes the removal of transit peptides required for the targeting of proteins from the mitochondrial matrix, across the inner membrane, into the inter-membrane space (178 aa)
     
  0.739
Phatr47594
Predicted protein; Catalyzes the removal of transit peptides required for the targeting of proteins from the mitochondrial matrix, across the inner membrane, into the inter-membrane space (599 aa)
     
  0.739
Phatr36969
Predicted protein (223 aa)
     
  0.739
Phatr10934
Predicted protein (112 aa)
     
  0.739
Phatr17885
Predicted protein (73 aa)
     
    0.540
Phatr15399
Predicted protein (191 aa)
     
 
  0.518
Sec61alpha
Transport protein Sec61 alpha subunit (472 aa)
     
  0.423
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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