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Phatr18579 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr18579" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr18579Predicted protein (510 aa)    
Predicted Functional Partners:
Phatr46516
Predicted protein (1051 aa)
     
 
  0.993
Phatr48920
Predicted protein (317 aa)
 
  0.993
Phatr18258
Predicted protein (743 aa)
     
  0.992
Phatr19552
Predicted protein (529 aa)
   
0.990
Phatr11703
Predicted protein (820 aa)
     
  0.989
BMS1
Ribosome biogenesis protein BMS1 (1096 aa)
     
  0.989
Phatr8777
Predicted protein (110 aa)
     
 
  0.983
Phatr7810
Predicted protein (98 aa)
     
 
  0.982
Phatr25549
Predicted protein (512 aa)
     
 
  0.982
Phatr9235
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1147 aa)
     
  0.981
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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