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STRINGSTRING
MCM2 protein (Phaeodactylum tricornutum) - STRING interaction network
"MCM2" - DNA helicase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCM2DNA helicase; Belongs to the MCM family (808 aa)    
Predicted Functional Partners:
Phatr45115
Predicted protein (1834 aa)
   
 
  0.965
Phatr9344
Predicted protein (389 aa)
     
 
  0.962
CDC6
Predicted protein (1107 aa)
   
 
  0.962
Phatr42935
Predicted protein (588 aa)
     
 
  0.961
POLA
DNA polymerase (1147 aa)
     
 
  0.950
Phatr42750
Predicted protein (654 aa)
     
 
  0.949
Phatr44146
DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication (285 aa)
     
 
  0.948
Phatr32848
Predicted protein (685 aa)
     
 
  0.942
Phatr52450
Predicted protein (154 aa)
     
 
  0.928
RPA1
Replication protein a large 70 kD subunit (606 aa)
     
 
  0.927
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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