STRINGSTRING
Phatr18769 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr18769" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr18769Predicted protein (294 aa)    
Predicted Functional Partners:
Phatr41645
Predicted protein (166 aa)
   
  0.821
AtpC
ATP synthase gamma chain, chloroplastic (369 aa)
   
        0.801
Phatr18398
ATP synthase gamma chain (305 aa)
   
        0.801
Phatr43944
Predicted protein (493 aa)
     
  0.799
Phatr9709
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (71 aa)
     
  0.768
ACPZ
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (127 aa)
     
  0.768
Phatr22919
Predicted protein (260 aa)
   
  0.735
Phatr28620
Predicted protein (136 aa)
     
  0.712
Phatr14260
Predicted protein (163 aa)
   
  0.678
petC
Cytochrome b6-f complex iron-sulfur subunit (217 aa)
     
  0.648
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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