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Phatr18859 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr18859" - 60S ribosomal protein L36 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr1885960S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family (108 aa)    
Predicted Functional Partners:
Phatr8185
Predicted protein (100 aa)
     
 
  0.999
Phatr50886
Predicted protein (145 aa)
     
 
  0.999
rps19
Predicted protein; Belongs to the universal ribosomal protein uS19 family (147 aa)
     
 
  0.999
rpl14
Predicted protein; Belongs to the universal ribosomal protein uL14 family (143 aa)
     
 
  0.999
Phatr21323
Predicted protein (137 aa)
     
 
  0.999
Phatr28147
Predicted protein (62 aa)
     
 
  0.999
Phatr9199
Predicted protein; Belongs to the universal ribosomal protein uS15 family (151 aa)
     
 
  0.999
Phatr30670
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family (85 aa)
     
 
  0.999
Phatr23687
Predicted protein (106 aa)
     
 
  0.999
Phatr19413
Predicted protein; Belongs to the eukaryotic ribosomal protein eL38 family (69 aa)
     
 
  0.999
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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