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chlM protein (Phaeodactylum tricornutum) - STRING interaction network
"chlM" - Magnesium-protoporphyrin IX methyltransferase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chlMMagnesium-protoporphyrin IX methyltransferase (258 aa)    
Predicted Functional Partners:
Phatr33017
Predicted protein; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (711 aa)
 
 
  0.988
CHLH
Protoporphyrin IX magnesium chelatase, subunit H (1343 aa)
 
 
  0.983
Phatr10100
Annotation not available (1250 aa)
 
 
  0.981
Phatr9634
Predicted protein (480 aa)
   
  0.845
Phatr48932
Predicted protein (721 aa)
   
  0.804
Phatr16283
Predicted protein (249 aa)
   
  0.804
ZEP2
Precursor of protein zeaxanthin epoxidase-like protein (192 aa)
     
  0.745
ZEP1
Zeaxanthin epoxidase (565 aa)
     
  0.744
ZEP3
Zeaxanthin epoxidase (391 aa)
     
  0.744
Phatr38985
Predicted protein (254 aa)
     
 
  0.710
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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