STRINGSTRING
Phatr19103 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr19103" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr19103Predicted protein (102 aa)    
Predicted Functional Partners:
Phatr9894
Predicted protein (140 aa)
   
  0.990
Phatr50701
Predicted protein (143 aa)
   
  0.990
Phatr29097
Predicted protein (225 aa)
   
  0.989
Phatr51291
Predicted protein (121 aa)
   
  0.989
Phatr23691
Predicted protein (130 aa)
   
  0.986
Phatr28147
Predicted protein (62 aa)
   
  0.986
Phatr13682
Predicted protein; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (220 aa)
   
  0.985
Phatr9411
30S ribosomal protein S15 (78 aa)
   
  0.982
Phatr7893
30S ribosomal protein S15 (85 aa)
   
  0.982
Phatr50886
Predicted protein (145 aa)
   
  0.982
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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