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sufS protein (Phaeodactylum tricornutum) - STRING interaction network
"sufS" - Cysteine desulfurase for iron-sulfur cluster formation suf in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufSCysteine desulfurase for iron-sulfur cluster formation suf (496 aa)    
Predicted Functional Partners:
Phatr48952
Predicted protein (791 aa)
       
  0.942
sufD
FeS assembly protein suf (690 aa)
 
  0.939
Phatr49903
Predicted protein (654 aa)
   
 
  0.937
Phatr7639
Predicted protein (124 aa)
   
  0.912
Phatr42129
Annotation not available (479 aa)
   
 
  0.909
IscU
Iron-sulphur assembly protein isc; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (160 aa)
     
  0.697
Phatr7780
Predicted protein (122 aa)
   
 
  0.646
Phatr14867
Predicted protein (88 aa)
   
 
  0.646
Phatr11154
Predicted protein (105 aa)
   
 
  0.646
METH
Methionine synthase (1245 aa)
       
  0.615
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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