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STRINGSTRING
Phatr19513 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr19513" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr19513Predicted protein (717 aa)    
Predicted Functional Partners:
gshB
Glutathione synthase. glutathione synthetase. GSH synthetase (567 aa)
     
 
  0.950
Phatr42276
Predicted protein (1263 aa)
   
 
  0.940
Phatr27240
Predicted protein (746 aa)
     
 
  0.936
Gsr_1
Glutathione-disulfide reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (507 aa)
       
  0.935
Gsr_2
Glutathione reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (496 aa)
       
  0.935
Phatr34976
Predicted protein (248 aa)
       
  0.912
Phatr48636
Glutathione peroxidase; Belongs to the glutathione peroxidase family (177 aa)
     
 
  0.912
Phatr13005
Glutathione peroxidase; Belongs to the glutathione peroxidase family (157 aa)
     
 
  0.912
Phatr1884
Predicted protein (435 aa)
     
 
  0.907
Phatr34422
Predicted protein (329 aa)
       
  0.904
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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