STRINGSTRING
Phatr19552 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr19552" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr19552Predicted protein (529 aa)    
Predicted Functional Partners:
Phatr48920
Predicted protein (317 aa)
   
  0.999
Phatr11894
Predicted protein (209 aa)
     
 
  0.997
Phatr11703
Predicted protein (820 aa)
     
  0.997
Phatr16814
Predicted protein (662 aa)
     
  0.997
Phatr45356
Predicted protein (479 aa)
     
 
  0.997
Phatr43447
Predicted protein (671 aa)
     
 
  0.997
Phatr46516
Predicted protein (1051 aa)
     
 
  0.997
Phatr42570
Predicted protein (1267 aa)
     
 
  0.996
Phatr8777
Predicted protein (110 aa)
     
 
  0.996
Phatr47058
Predicted protein (606 aa)
     
      0.996
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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